PaperarXiv:2602.03858

PENGUIN: General Vital Sign Reconstruction from PPG with Flow Matching State Space Model

Preprint2026Added Sep 26, 2026

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Authors: Shuntaro Suzuki, Shuitsu Koyama, Shinnosuke Hirano, Shunya Nagashima

arXiv preprint (eess.SP, cs.LG) · Accepted for presentation at ICASSP2026

TL;DR

Photoplethysmography (PPG) plays a crucial role in continuous cardiovascular health monitoring as a non-invasive and cost-effective modality. However, PPG signals are susceptible to motion artifacts and noise, making accurate estimation of vital signs such as arterial blood pressure (ABP) challenging. Existing estimation methods are often restricted to a single-task or environment, limiting their generalizability across diverse PPG decoding scenarios.

  • Form factor: other

Abstract

Photoplethysmography (PPG) plays a crucial role in continuous cardiovascular health monitoring as a non-invasive and cost-effective modality. However, PPG signals are susceptible to motion artifacts and noise, making accurate estimation of vital signs such as arterial blood pressure (ABP) challenging. Existing estimation methods are often restricted to a single-task or environment, limiting their generalizability across diverse PPG decoding scenarios. Moreover, recent general-purpose approaches typically rely on predictions over multi-second intervals, discarding the morphological characteristics of vital signs. To address these challenges, we propose PENGUIN, a generative flow-matching framework that extends deep state space models, enabling fine-grained conditioning on PPG for reconstructing multiple vital signs as continuous waveforms. We evaluate PENGUIN using six real-world PPG datasets across three distinct vital sign reconstruction tasks (electrocardiogram reconstruction, respiratory monitoring, and ABP monitoring). Our method consistently outperformed both task-specific and general-purpose baselines, demonstrating PENGUIN as a general framework for robust vital sign reconstruction from PPG.

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Tasks & signals

Tasks

Signal denoising

Signals

Keywords

vital-signsreconstructionflow-matchingSSM

How it works

How Method works: Setup → Method → TargetSetup: Signals (PPG); Form factor (other). Method: Method (State-space model · Masked reconstruction). Target: Signal denoising.SetupSignals: PPGSignalsPPGForm factor: otherForm factorotherMethodMethodState-space model · Masked…TargetSignal denoisingSignal denoising

Cite this paper

APA

Suzuki, S., Koyama, S., Hirano, S., & Nagashima, S. (2026). PENGUIN: General Vital Sign Reconstruction from PPG with Flow Matching State Space Model. arXiv preprint · Accepted for presentation at ICASSP2026. https://doi.org/10.48550/arXiv.2602.03858

BibTeX

@misc{suzuki2026penguin,
  title         = {{PENGUIN: General Vital Sign Reconstruction from PPG with Flow Matching State Space Model}},
  author        = {Suzuki, Shuntaro and Koyama, Shuitsu and Hirano, Shinnosuke and Nagashima, Shunya},
  year          = {2026},
  howpublished  = {arXiv preprint · Accepted for presentation at ICASSP2026},
  doi           = {10.48550/arXiv.2602.03858},
  eprint        = {2602.03858},
  archivePrefix = {arXiv}
}

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